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plugin:analysis:3d_mereotopology:start [2019/04/12 13:13] (current)
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 +
 +===== 3D MereoTopology ​ =====
 +Computes RCC8D relationship between 3D Objects.
 +
 +===== Author =====
 +Thomas Boudier with the collaboration of G. Landini and D. Randell.
 +
 +===== Description =====
 +Objects can have many relationship between them (inclusion, overlapping,​ ...). All the possible relationship are formalized in the MereoTopology approach (see [[http://​www.mecourse.com/​landinig/​software/​spatial/​rcc8d.html|Landini'​s page]] for details). ​
 +
 +You need two images with labelled objects.
 +
 +
 +
 +===== Download =====
 +For details go to the [[plugin:​stacks:​3d_ij_suite:​start|3D ImageJ Suite]].
 +
 +===== Citation =====
 +When using the //3D Analysis// plugins for publication,​ please refer to :
 +
 +J. Ollion, J. Cochennec, F. Loll, C. Escud√©, T. Boudier. (**2013**) TANGO: A Generic Tool for High-throughput 3D Image Analysis for Studying Nuclear Organization. //​Bioinformatics//​ 2013 Jul 15;​29(14):​1840-1. [[http://​dx.doi.org/​10.1093/​bioinformatics/​btt276|doi]]
 +
 +DA. Randell, G. Landini,A. Galton. (**2012**) Discrete Mereotopology for Spatial Reasoning in Automated Histological Image Analysis. //IEEE Trans Pattern Anal Mach Intell.// 2012 May 31. [[http://​dx.doi.org/​10.1109/​TPAMI.2012.128|doi]]
 +
 +===== License =====
 +GPL distribution (see [[http://​www.cecill.info/​index.en.html|license]]). ​
 +
 +
 +===== Changelog =====
 +
 +  * 24/10/2013 core V2.7 : improved computation for isotropic analysis (//​RX=RY=RZ//​)
 +  * 27/04/2015 core V3.1 : bug in colocalisation (rare objects configuration)
 +
 +
  
plugin/analysis/3d_mereotopology/start.txt · Last modified: 2019/04/12 13:13 (external edit)